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Faculty Publications from 2013

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Assessing Methods for Assigning SNPs to Genes in Gene-Based Tests of Association Using Common Variants, Ashley Petersen, Carolina Alvarez, Scott DeClaire, and Nathan L. Tintle

Ecological Science and Transformation to the Sustainable City, S.T.A. Pickett, Christopher G. Boone, Brian P. McGrath, M. L. Cadenasso, Daniel L. Childers, Laura A. Ogden, Melissa McHale, and Morgan Grove

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Targeted Brain Derived Neurotropic Factors (BDNF) Delivery across the Blood-Brain Barrier for Neuro-Protection Using Magnetic Nano Carriers: An In-Vitro Study, Sudheesh Pilakka-Kanthikeel, Venkata Subba Rao Atluri, Vidya Sagar, Shailendra K. Saxena, and Madhavan Nair

Biomarker Assessment of Spatial and Temporal Changes in the Composition of Flocculent Material (Floc) in the Subtropical Wetland of the Florida Coastal Everglades, Oliva Pisani, J. William Louda, and Rudolf Jaffe´

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Association between Posttraumatic Stress Disorder and Inflammation: A Twin Study, Laura Plantinga, J. Douglas Bremner, Andrew A. Miller, Dean P. Jones, Emir Veledar, Jack Goldberg, and Viola Vaccarino

Frugivory and Seed Dispersal by Crocodilians: An Overlooked Form of Saurochory?, S. G. Platt, R. M. Elsey, H. Liu, T. R. Rainwater, J. C. Nifong, Adam E. Rosenblatt, Michael R. Heithaus, and F. J. Mazzotti

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Okadaic Acid Meet and Greet: An Insight into Detection Methods, Response Strategies and Genotoxic Effects in Marine Invertebrates, María Verónica Prego-Faraldo, Vanessa Valdiglesias, Josefina Méndez, and Jose M. Eirin-Lopez

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Increased rate of cholecystectomies performed with doubtful or no indications after laparoscopy introduction: a single center experience, Elia Pulvirenti, Adriana Toro, Michel Gagner, Maurizio Mannino, and Isidoro Di Carlo

Diatom-based paleolimnological reconstruction of regional climate and local land-use change from a protected sinkhole lake in southern Florida, USA, Amanda K. Quillen, Evelyn E. Gaiser, and Eric C. Grimm

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Ashwagandha (Withania somnifera) Reverses β-Amyloid1-42 Induced Toxicity in Human Neuronal Cells: Implications in HIV-Associated Neurocognitive Disorders (HAND), Kesava Rao Venkata Kurapati, Venkata Atluri, Thangavel Samikkannu, and Madhavan Nair

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ICA model order selection of task co-activation networks, Kimberly L. Ray, D. Reese McKay, Peter M. Fox, Michael C. Riedel, Angela M. Uecker, Christian F. Beckman, Stephen M. Smith, Peter T. Fox, and Angela Laird

Ecological Novelty and the Emergence of Evolutionary Traps, Bruce A. Robertson, Jennifer S. Rehage, and Andrew Sih

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The Next Generation of Scientists: Examining the Experiences of Graduate Students in Network-Level Social-Ecological Science, Michele Romolini, Sydne Record, Rebecca Garvoille, Yevgeniy Marusenko, and R. Stuart Geiger

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The Roles of Large Top Predators in Coastal Ecosystems: New Insights from Long Term Ecological Research, Adam E. Rosenblatt, Michael R. Heithaus, Martha E. Mather, Philip Matich, James C. Nifong, William J. Ripple, and Brian R. Silliman

Intra-Population Variation in Activity Ranges, Diel Patterns, Movement Rates, and Habitat Use of American Alligators in a Subtropical Estuary, Adam E. Rosenblatt, Michael R. Heithaus, Frank J. Mazzotti, Michael Cherkiss, and Brian M. Jeffery

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Adult age-dependent differences in resting-state connectivity within and between visual-attention and sensorimotor networks, Christian Roski, Svenja Caspers, Robert Langner, Angela Laird, Peter Fox, Karl Zilles, Katrin Amunts, and Simon Eichhoff

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Specific Increase in MDR1 Mediated Drug-Efflux in Human Brain Endothelial Cells following Co-Exposure to HIV-1 and Saquinavir, Upal Roy, Christine Bulot, Kerstin Honer zu Bentrup, and Debasis Mondal

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A Suite of Prey Traits Determine Predator and Nutrient Enrichment Effects in a Tri-Trophic Food Chain, Clifton B. Ruehl and Joel C. Trexler

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Tree Island Response to Fire and Flooding in the Short-Hydroperiod Marl Prairie Grasslands of the Florida Everglades, Pablo L. Ruiz, Jay P. Sah, Michael S. Ross, and Adam S. Spitzig

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HIV infection and drugs of abuse: role of acute phase proteins, Thangavel Samikkannu, Kurapti VK Rao, Adriana Y. Arias, Aarthi Kalaichezian, Vidya Sagar, Changwon Yoo, and Madhavan PN Nair

Challenges in using siliceous subfossils as a tool for inferring past water level and hydroperiod in Everglades marshes, Christopher Sanchez, Evelyn E. Gaiser, Colin J. Saunders, Anna H. Wachnicka, Nicholas Oehm, and Christopher Craft

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Posttraumatic Stress Disorder and Impaired Autonomic Modulation in Male Twins, Amit J. Shah, Rachel Lampert, Jack Goldberg, Emir Veledar, J. Douglas Bremner, and Viola Vaccarino

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Numerical Investigation of the Effect of Magnetic Field on Natural Convection in a Curved-Shape Enclosure, M. Shekholeslami, I. Hashim, and Soheil Soleimani

Sediment Accretion and Organic Carbon Burial Relative to Sea-Level Rise and Storm Events in Two Mangrove Forests in Everglades National Park, Joseph M. Smoak, Joshua L. Breithaupt, Thomas J. Smith III, and Christian J. Sanders

Sediment accretion and organic carbon burial relative to sea-level rise and storm events in two mangrove forests in Everglades National Park, Joseph M. Smoak, Joshua L. Breithaupt, Thomas J. Smith III, and Christian J. Sanders

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The CHROMEVALOA Database: A Resource for the Evaluation of Okadaic Acid Contamination in the Marine Environment Based on the Chromatin-Associated Transcriptome of the Mussel Mytilus galloprovincialis, Victoria Suárez-Ulloa, Juan Fernández-Tajes, Vanessa Aguiar-Pulido, Ciro Rivera-Casas, Rodrigo González-Romero, Juan Ausio, Josefina Méndez, Julián Dorado, and Jose M. Eirin-Lopez

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Bivalve Omics: State of the Art and Potential Applications for the Biomonitoring of Harmful Marine Compounds, Victoria Suárez-Ulloa, Juan Fernández-Tajes, Chiara Manfrin, Marco Gerdol, Paola Venier, and José M. Eirín-López

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Powerful Inhibition of Experimental Human Pancreatic Cancers by Receptor Targeted Cytotoxic LH-RH analog AEZS-108, Karoly Szepeshazi, Andrew V. Schally, Norman L. Block, Gabor Halmos, Mehrdad Nadji, Luca Szalontay, Irving Vidaurre, Andrew Abi-Chaker, and Ferenc G. Rick

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Integrated Carbon Budget Models for the Everglades Terrestrial-Coastal-Oceanic Gradient: Current Status and Needs for Inter-Site Comparisons, Tiffany G. Troxler, Evelyn E. Gaiser, Jordan Barr, Joseph D. Fuentes, Rudolf Jaffe´, Daniel L. Childers, Ligia Collado-Vides, Victor H. Rivera-Monroy, Edward Castañeda-Moya, William T. Anderson, Randy Chambers, Meilian Chen, Carlos Coronado-Molina, Stephen E. Davis, Victor Engel, Carl Fitz, James W. Fourqurean, Thomas A. Frankovich, John Kominoski, Chris Madden, Sparkle L. Malone, Steve F. Oberbauer, Paulo Olivas, Jennifer H. Richards, Colin Saunders, Jessica Schedlbauer, Leonard J. Scinto, Fred Sklar, Tom Smith, Joseph M. Smoak, Gregory Starr, Robert R. Twilley, and Kevin R.T. Whelan

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Automated annotation of functional imaging experiments via multi-label classification, Matthew D. Turner, Chayan Chakrabarti, Thomas B. Jones, Jiawei F. Xu, Peter T. Fox, George F. Luger, Angela Laird, and Jessica A. Turner

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Posttraumatic Stress Disorder and Incidence of Coronary Heart Disease: A Twin Study, Viola Vaccarino, Jack Goldberg, Cherie Rooks, Amit J. Shah, Emir Veledar, Tracy L. Faber, John R. Votaw, Christopher W. Forsberg, and J. Douglas Bremner

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Obesity Indicators by Race/Ethnicity for Diagnosis of Cardiometabolic Diseases for a US Representative Sample of Adults, Joan A. Vaccaro and Fatma G. Huffman

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Race/Ethnicity-, Gender- and Age-Specific Differences in Micronutrient Intakes of US Adults with and without Diabetes, Joan A. Vaccaro and Fatma G. Huffman

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Phylloquinone (Vitamin K₁) Intake and Pulse Pressure as a Measure of Arterial Stiffness in Older Adults, Joan Vaccaro and Fatma G. Huffman

Young infants match facial and vocal emotional expressions of other infants, Mariana Vaillant-Molina, Lorraine E. Bahrick, and Ross Flom

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Computational Modeling Reveals Distinct Effects of HIV and History of Drug Use on Decision-Making Processes in Women, Jasmin Vassileva, Woo-Young Ahn, Kathleen M. Weber, Jerome R. Busemeyer, Julie C. Stout, Raul Gonzalez, and Mardge H. Cohen

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Microhabitat Selection by Marine Mesoconsumers in a Thermally Heterogeneous Habitat: Behavioral Thermoregulation or Avoiding Predation Risk?, Jeremy J. Vaudo and Michael R. Heithaus

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Impact of Vegetable Preparation Method and Taste-Test on Vegetable Preference for First Grade Children in the United States, Marie Veronyck Colas, Joan Vaccaro, Gustavo G. Zarini, and Fatma G. Huffman

Response of diatom assemblages to 130 years of environmental change in Florida Bay (USA), Anna Wachnicka, Laurel S. Collins, and Evelyn E. Gaiser

Correspondence of historic salinity fluctuations in Florida Bay, USA, to atmospheric variability and anthropogenic changes, Anna Wachnicka, Evelyn E. Gaiser, and Laurel S. Collins

Impact of Late Holocene climate variability and anthropogenic activities on Biscayne Bay (Florida, U.S.A.): Evidence from diatoms, Anna Wachnicka, Evelyn E. Gaiser, Lynn Wingard, Henry Briceño, and Peter Harlem

Impact of Late Holocene Climate Variability and Anthropogenic Activities on Biscayne Bay (Florida, U.S.A.): Evidence From Diatoms, Anna Honorata Wachnicka, Evelyn E. Gaiser, Lynn Wingard, Henry O. Briceño, and Peter Harlem

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Coherent manipulation of quantum states in a coupled cavity-atom system, Yanhua Wang, Jinyin Wan, Bichen Zhou, Jiepeng Zhang, and Yifu Zhu

Historic primary producer communities linked to water quality and hydrologic changes in the northern Everglades, Matthew N. Waters, Joseph M. Smoak, and Colin J. Saunders

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Remote-Sensing Monitoring of Tide Propagation Through Coastal Wetlands, Shimon Wdowinski, Sang-Hoon Hong, Amanda Mulcan, and Brian Brisco

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Multi-region hemispheric specialization differentiates human from nonhuman primate brain function, Hsiao-Ying Wey, Kimberley A. Phillips, D. Reese McKay, Angela R. Laird, Peter Kochunov, M. Duff Davis, David C. Glahn, Timothy Q. Duong, and Peter T. Fox

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Bayes multiple decision functions, Wensong Wu and Edsel A. Pena

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Responsiveness of voltage-gated calcium channels in SH-SY5Y human neuroblastoma cells on quasi-three-dimensional micropatterns formed with poly (l-lactic acid), Ze-Zhi Wu, Zheng-Wei Wang, Li-Guang Zhang, Zhi-Xing An, Dong-Huo Zhong, Qi-Ping Huang, Mei-Rong Luo, Yan-Jian Liao, Liang Jin, Chen-Zhong Li, and William S. Kisaalita

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PRESEE: An MDL/MML Algorithm to Time-Series Stream Segmenting, Kaikuo Xu, Yexi Jiang, Mingjie Tang, Changan Yuan, and Changjie Tang

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Base excision repair of oxidative DNA damage coupled with removal of a CAG repeat hairpin attenuates trinucleotide repeat expansion, Meng Xu, Yanhao Lai, Justin Torner, Yanbin Zhang, Zunzhen Zhang, and Yuan Liu

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Evaluating the Distribution of Terrestrial Dissolved Organic Matter in a Complex Coastal Ecosystem Using Fluorescence Spectroscopy, Youhei Yamashita, Joseph N. Boyer, and Rudolf Jaffe´

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Synthesis and Biological Evaluation of Novel Folic Acid Receptor-Targeted, β-Cyclodextrin-Based Drug Complexes for Cancer Treatment, Juan-Juan Yin, Sonali Sharma, Stepan P. Shumyak, Zhi-Xin Wang, Zhi-Wei Zhou, Yangde Zhang, Peixuan Guo, Chen-Zhong Li, Jagat R. Kanwar, Tianxin Yang, Shyam S. Mohapatra, Wanqing Liu, Wei Duan, Jian-Cheng Wang, Qi Li, Xueji Zhang, Jun Tan, Lee Jia, Jun Liang, Ming Q. Wei, Xioatian Lee, and Shu-Feng Zhou

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Preschool Children with Head Injury: Comparing Injury Severity Measures And Clinical Care, JoAnne M. Youngblut, Carmen Caicedo, and Dorothy Brooten

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Application of Receiver Operating Characteristic (ROC) Curves for Explosives Detection Using Different Sampling and Detection Techniques, Mimy Young, Wen Fan, Anna Raeva, and Jose Almirall

Simulating Mechanisms for Dispersal, Production and Stranding of Small Forage Fish in Temporary Wetland Habitats, Simeon Yurek, Donald L. DeAngelis, Joel C. Trexler, Fred Jopp, and Douglas D. Donalson

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Lower limb muscle coactivation levels in healthy younger and older adults during functional dual-task gait, Camilla Zamfolini Hallal, Nise Ribeiro Marques, Edgar Vieira, and Denis Brunt

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Fabrication of Dense Non-Circular Nanomagnetic Device Arrays Using Self-Limiting Low-Energy Glow-Discharge Processing, Zhen Zheng, Long Chang, Ivan Nekrashevich, Paul Ruchhoeft, Sakhrat Khizroev, and Dmitri Litvinov

Faculty Publications from 2012

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Are marginalized women being left behind? A population-based study of institutional deliveries in Karnataka, India, Paul C. Adamson, Karl Krupp, Bhavana Niranjankumar, Alexandra H. Freeman, Mudassir Khan, and Purnima Madhivanan

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Are marginalized women being left behind? A population-based study of institutional deliveries in Karnataka, India, Paul C. Adamson, Karl Krupp, Bhavana Niranjankumar, Alexandra H. Freeman, Mudassir Khan, and Purniman Madhivanan

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Are marginalized women being left behind? A population based study of institutional births in Rural India, Paul Adamson, Karl Krupp, Bhavana NiranjanKumar, Alexandra H. Freeman, Mudassir Khan, and Purnima Madhivanan

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Is Subdural Peritoneal Shunt Placement an Effective Tool for the Management of Recurrent/Chronic Subdural Hematoma?, Andres M. Alvarez-Pinzon, Alan A. Stein, Jose E. Valerio, Jennifer A. Escalante, Nithia Lopez, Aizik L. Wolf, and Victor Delgado

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Multilevel-3D Bit Patterned Magnetic Media with 8 Signal Levels Per Nanocolumn, Nissim Amos, John Butler, Beomseop Lee, Meir H. Shachar, Bing Hu, Yuan Tian, Jeongmin Hong, Davil Garcia, Rabee M. Ikkawi, Robert C. Haddon, Dmitri Litvinov, and Sakhrat Khizroev

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Multilevel-3D Bit Patterned Magnetic Media with 8 Signal Levels Per Nanocolumn, Nissim Amos, John Butler, Beomseop Lee, Meir H. Shachar, Bing Hu, Yuan Tian, Jeongmin Hong, Davil Garcia, Rabee M. Ikkawi, Robert C. Haddon, Dmitri Litvinov, and Sakhrat Khizroev

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Ventajas y Desventajas del Bilinguismo [Advantages and Disadvantages of Bilingualism], Alfredo Ardilla

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Effect of Cocaine on HIV Infection and Inflammasome Gene Expression Profile in HIV Infected Macrophages, Venkata Subba Rao Atluri, Sudheesh Pilakka-Kanthikeel, Gabriella Garcia, Rahul Dev Jayant, Vidya Sagar, Thangavel Samikkannu, Adriana Yndart, and Madhavan Nair

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Preface: Physics of Cancer, Robert H. Austin and Bernard S. Gerstman

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Knowledge of Latin American Obstetricians and Gynecologists regarding Heavy Menstrual Bleeding, Luis Bahamondes, Victor Marin, Silvia Ciarmatori, Agnaldo L. Silva-Filho, Juan Manuel Acuna, and Maria Y. Makuch

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The role of intersensory redundancy in early perceptual, cognitive, and social development, Lorraine E. Bahrick and Robert Lickliter

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A Summary Catalogue of Microbial Drinking Water Tests for Low and Medium Resource Settings, Robert Bain, Jamie Bartram, Mark Elliott, Robert Matthews, Lanakila McMahan, Rosalind Tung, Patty Chuang, and Stephen Gundry

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Mutation at the Human D1S80 Minisatellite Locus, Kuppareddi Balamurugan, Martin Tracey, Uwe Heine, George C. Maha, and George T. Duncan

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Mutation at the Human D1S80 Minisatellite Locus, Kuppareddi Balamurugan, Martin L. Tracey, Uwe Heine, George C. Maha, and George T. Duncan

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A dynamic and intricate regulatory network determines Pseudomonas aeruginosa virulence, Deepak Balasubramania, Lisa Schneper, Hansi Kumari, and Kalai Mathee

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The Regulatory Repertoire of Pseudomonas aeruginosa AmpC ß-Lactamase Regulator AmpR Includes Virulence Genes, Deepak Balasubramania, Lisa Schneper, Massimo Merighi, Roger Smith, Giri Narasimhan, Stephen Lory, and Kalai Mathee

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The Regulatory Repertoire of Pseudomonas aeruginosa AmpC ß-Lactamase Regulator AmpR Includes Virulence Genes, Deepak Balasubramania, Lisa Schneper, Massimo Merighi, Roger Smith, Giri Narasimhan, Stephen Lory, and Kalai Mathee

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Hurricane disturbance and recovery of energy balance, CO2 fluxes and canopy structure in a mangrove forest of the Florida Everglades, Jordan G. Barr, Vic Engel, Thomas J. Smith, and Jose D. Fuentes

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Thalamic medial dorsal nucleus atrophy in medial temporal lobe epilepsy: A VBM meta-analysis, Daniel S. Barron, P. Mickle Fox, Angela Laird, Jennifer L. Robinson, and Peter T. Fox

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Evaluation of a Community-Based Falls Prevention Program in South Florida, 2008-2009, Anamica Batra, Michael Melchior, Laura Seff, Newman Frederick, and Richard C. Palmer

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A Peculiarly Cerebroid Convex Zygo-Dodecahedron is an Axiomatically Balanced “House of Blues”: The Circle of Fifths to the Circle of Willis to Cadherin Cadenzas, David A. Becker

On the origins of disorganized attachment and internal working models: Paper I. A dyadic systems approach, Beatrice Beebe, Frank Lachmann, Sara Markese, and Lorraine Bahrick

On the origins of disorganized attachment and internal working models: Paper II. An empirical microanalysis of 4-month mother-infant interaction, Beatrice Beebe, Frank M. Lachmann, Sara Markese, Karen A. Buck, Lorraine E. Bahrick, Henian Chen, Patricia Cohen, Howard Andrews, Stanley Feldstein, and Joseph Jaffe

Fatty acids and stable isotopes as indicators of early-life feeding and potential maternal resource dependency in the bull shark Carcharhinus leucas, Laura L. Belicka, Philip Matich, Rudolf Jaffe, and Michael R. Heithaus

A molecular and stable isotopic approach to investigate the importance of algal and detrital energy pathways in a freshwater marsh, Laura L. Belicka, Eric R. Sokol, J. Matthew Hoch, Rudolf Jaffe, and Joel C. Trexler

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Coral Thermal Tolerance: Tuning Gene Expression to Resist Thermal Stress, Anthony J. Bellatuono, Camila Granados-Cifuentes, David J. Miller, Ove Hoegh-Guldberg, and Mauricio Rodriguez-Lanetty

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Quality of experience evaluation of voice communication: an affect-based approach, Abhishek Bhattacharya, Wanmin Wu, and Zhenya Wang

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Use of evidence to support healthy public policy: a policy effectiveness–feasibility loop, Sarah Bowman, Nigel Unwin, Julia Critchley, Simon Capewell, Abdullatif Husseini, Wasim Maziak, Shahaduz Zaman, Habiba Ben Romdhane, Fouad Fouad, Peter Phillmore, Belgin Unal, Rana Khatib, Azza Shoaimi, and Balsam Ahmad

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Phylogenetics links monster larva to deep-sea shrimp, Heather D. Bracken-Grissom, Darryl L. Felder, Nicole L. Vollmer, Joel W. Martin, and Keith A. Crandall

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Beyond harvests in the commons: multi-scale governance and turbulence in indigenous/community conserved areas in Oaxaca, Mexico, David Bray, Elvira Duran, and Oscar Antonio Molina-Gonzalez

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Investigating student communities with network analysis of interactions in a physics learning center, Eric Brewe, Laird Kramer, and Vashti Sawtelle

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Women With High-Risk Pregnancies, Problems, and APN Interventions, Dorothy Brooten, JoAnne M. Youngblut, Deborah Donahue, Margaret Hamilton, Jean Hannan, and Donna Felber Neff

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Health Problems and APN Interventions in Pregnant Women with Diabetes, Dorothy Brooten, JoAnne M. Youngblut, Jean Hannan, Frank Guido-Sanz, Donna Felber, and Wannee Deoisres

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Cultural Competency Observation Tool, David R. Brown, Tim Spruill, Agueda Hernandez, Luther Brewster, Michel Celestin, Barry Nierenberg, Rodolfo Bonnin, Siri Akal, Cheryl Brewster, Mitchell Hammer, Simar Singh, and Bryan Page

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Identification of Conserved Splicing Motifs in Mutually Exclusive Exons of 15 Insect Species, Patricia Buendia, John Tyree, Robert Laredo, and Shu-Ning Hsu

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Dimensions of gender relations and reproductive health inequity perceived by female undergraduate students in the Mekong Delta of Vietnam: a qualitative exploration, Thanh Cong Bui, Christine M. Markham, Michael W. Ross, Mark L. Williams, R. Palmer Beasley, Ly TH Tran, Huong TH Nguyen, and Thach Ngoc Le

An assessment of natural and human disturbance effects on Mexican ecosystems: current trends and research gaps, Luis E. Calderon-Aguilera, Vıctor H. Rivera-Monroy, Luciana Porter-Bolland, Angelina Martinez-Yrizar, Lydia B. Ladah, Miguel Martinez-Ramos, Javier Alcocer, Ana Luisa Santiago-Perez, Hector A. Hernandez-Arana, Victor M. Reyes-Gomez, Diego R. Perez-Salicrup, Vicente Dıaz-Nun˜ez, Joaquin Sosa-Ramırez, Jorge Herrera-Silveira, and Alberto Burquez

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Negative relationships between the nutrient and carbohydrate content of the seagrass Thalassia testudinum, Justin E. Campbell, Laura A. Yarbro, and James W. Fourqurean

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Transcriptional Response of Mucoid Pseudomonas aeruginosa to Human Respiratory Mucus, V. Cattoir, Giri Narasimhan, D. Skurnik, H. Aschard, D. Roux, R. Ramphal, J. Jyot, and S. Lory

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A Modified Resource Distribution Fairness Measure, Zhenmin Chen

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Interval and Point Estimators for the Location Parameter of the Three-Parameter Lognormal Distribution, Zhenmin Chen and Feng Miao

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Deployment of a Hybrid Multicast Switch in Energy-Aware Data Center Network: A Case of Fat-Tree Topology, Tosmate Cheocherngngarn, Jean Andrian, and Deng Pan

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Examining the Determinants of Sexual Violence Among Young, Married Women in Southern India, Karuna S. Chibber, Karl Krupp, Nancy Padian, and Purnima Madhivanan