Articles from 2017
Halophytes can salinize soil when competing with glycophytes, intensifying effects of sea level rise in coastal communities, Kristie S. Wendelberger and Jennifer H. Richards
Laucysteinamide A, a Hybrid PKS/NRPS Metabolite from a Saipan Cyanobacterium, cf. Caldora penicillata, Chen Zhang, C. Benjamin Naman, Niclas Engene, and William H. Gerwick
Submissions from 2016
Metagenomics, Metatranscriptomics, and Metabolomics Approaches for Microbiome Analysis, Vanessa Aguiar-Pulido, Wenrui Huang, Victoria Suarez-Ulloa, Trevor Cickovski, Kalai Mathee, and Giri Narasimhan
Effects of gamma irradiation on the biomechanical properties of peroneus tendons, Christopher M. Aguila, Gaëtan J.R. Delcroix, David N. Kaimrajh, Edward L. Milne, H. Thomas Temple, and Loren L. Latta
Carbon storage in seagrass soils: long-term nutrient history exceeds the effects of near-term nutrient enrichment, A. R. Armitage and James W. Fourqurean
Mechanisms That Generate Resource Pulses in a Fluctuating Wetland, Bryan A. Boston, Dale E. Gawlik, and Joel C. Trexler
A once in 10 year drought alters the magnitude and quality of a floodplain prey subsidy to coastal river fishes, Ross E. Boucek, Mariajesus Soula, Felipe Tamayo, and Jennifer S. Rehage
A once in ten year drought alters the magnitude and quality of a floodplain trophic subsidy to coastal river fishes, Ross E. Boucek, Mariajesus Soula, Felipe Tamayo, and Jennifer S. Rehage
Uniting paradigms of connectivity in marine ecology, Christopher J. Brown, Alastair R. Harborne, Claire B. Paris, and Peter J. Mumby
Phylogeny of Stenopodidea (Crustacea: Decapoda) shrimps inferred from nuclear and mitochondrial genes reveals non-monophyly of the families Spongicolidae and Stenopididae, and most of their composite genera, Chien-Lin Chen, Joseph W. Goy, Heather D. Bracken-Grissom, Darryl L. Felder, Ling Ming Tsang, and Tin-Yam Chan
A review of seagrass economic valuations: Gaps and progress in valuation approaches, Bryan M. Dewsbury, Mahadev Bhat, and James W. Fourqurean
Functional Diversification after Gene Duplication: Paralog Specific Regions of Structural Disorder and Phosphorylation in p53, p63, and p73, Helena G. Dos Santos, Janelle Nunez-Castilla, and Jessica Siltberg-Liberles
Paralog-Specific Patterns of Structural Disorder and Phosphorylation in the Vertebrate SH3–SH2–Tyrosine Kinase Protein Family, Helena G. Dos Santos and Jessica Siltberg-Liberles
Seasonal regulation of herbivory and nutrient effects on macroalgal recruitment and succession in a Florida coral reef, Alain Duran, Ligia Collado-Vides, and Deron E. Burkepile
Commentary: Novel competitors shape species' responses to climate change, Belen Fadrique and Kenneth J. Feeley
Estimating the global conservation status of more than 15,000 Amazonian tree species, Kenneth J. Feeley
Environmental drivers of diurnal visits by transient predatory fishes to Caribbean patch reefs, Alastair R. Harbonne, J. D. Selwyn, J. M. Lawson, and M. Galo
Marine mammals and sonar: Dose-response studies, the risk-disturbance hypothesis and the role of exposure context, Catriona M. Harris, Len Thomas, Erin A. Falcone, John Hildebrand, Dorian Houser, Petter H. Kvadsheim, Frans-Peter A. Lam, Patrick J.O. Miller, David J. Moretti, Andrew J. Read, Hans Slabbekoorn, Brandon L. Southall, Peter L. Tyack, Douglas Wartzok, and Vincent M. Janick
Examination of Surface Temperature Modification by Open-Top Chambers along Moisture and Latitudinal Gradients in Arctic Alaska Using Thermal Infrared Photography, Nathan C. Healey, Steve F. Oberbauer, and Robert D. Hollister
Genome Evolution in the Obligate but Environmentally Active Luminous Symbionts of Flashlight Fish, Tory A. Hendry, Jeffrey R. de Wet, Katherine E. Dougan, and Paul V. Dunlap
Fertilization Changes Seagrass Community Structure but not Blue Carbon Storage: Results from a 30-Year Field Experiment, Jason L. Howard, Alex Perez, Christian Lopes, and James W. Fourqurean
Relations between morphology, buoyancy and energetics of requiem sharks, Gil Iosilevskii and Yannis Papastamatiou
Inferring animal social networks and leadership: applications for passive monitoring arrays, David M.P. Jacoby, Yannis Papastamatiou, and Robin Freeman
Genetic Patterns of Domestication in Pigeonpea (Cajanus cajan (L.) Millsp.) and Wild Cajanus Relatives, Mulualem T. Kassa, R. Varma Penmetsa, Noelia Carrasquilla-Garcia, Birinchi K. Sarma, Subhojit Datta, Hari D. Upadhyaya, Rajeev K. Varshney, Eric J.B. von Wettberg, and Douglas R. Cook
LTQ-XL mass spectrometry proteome analysis expands the Pseudomonas aeruginosa AmpR regulon to include cyclic di-GMP phosphodiesterases and phosphoproteins, and identifies novel open reading frames, Hansi Kumari, Senthil K. Murugapiran, Deepak Balasubramania, Lisa Schneper, Massimo Merighi, David Sarracino, Stephen Lory, and Kalai Mathee
Density Dependence Drives Habitat Production and Survivorship of Acropora cervicornis Used for Restoration on a Caribbean Coral Reef, Mark C. Ladd, Andrew A. Shantz, Ken Nedimyer, and Deron E. Burkepile
Analysis of animal accelerometer data using hidden Markov models, Vianey Leos-Barajas, Theoni Photopoulou, Roland Langrock, Toby A. Patterson, Yuuki Watanabe, Megan Murgatroyd, and Yannis Papastamatiou
Sensitivity to low-temperature events: Implications for CO2 dynamics in subtropical coastal ecosystems, Sparkle L. Malone, Jordan Barr, Jose D. Fuentes, Steven F. Oberbauer, Christina L. Staudhammer, Evelyn E. Gaiser, and Gregory Starr
Algal richness and life-history strategies are influenced by hydrology and phosphorus in two major subtropical wetlands, Luca Marazzi, Evelyn E. Gaiser, Vivienne J. Jones, Franco A.C. Tobias, and Anson W. Mackay
The neurotranscriptome of the Aedes aegypti mosquito, Benjamin J. Matthews, Carolyn S. McBride, Matthew DeGennaro, Orion Despo, and Leslie B. Vosshall
Salinity Adaptation and the Contribution of Parental Environmental Effects in Medicago truncatula, Ken S. Moriuchi, Maren L. Friesen, Matilde A. Cordeiro, Mounawer Badri, Wendy T. Vu, Bradley J. Main, Mohamed Elarbi Aouani, Sergey V. Nuzhdin, Sharon Y. Strauss, and Eric JB von Wettberg
Contributions of organic and inorganic matter to sediment volume and accretion in tidal wetlands at steady state, James T. Morris, Donald C. Barber, John C. Callaway, Randy Chambers, Scott C. Hagen, Charles S. Hopkins, Beverly J. Johnson, Patrick Megonigal, Scott C. Neubauer, Tiffany Troxler-Gann, and Cathleen Wigand
Climate seasonality limits leaf carbon assimilation and wood productivity in tropical forests, Steve F. Oberbauer
Life in the Underworld: Anchialine cave biology in the era of speleogenomics, Jorge L. Perez-Moreno, Thomas M. Iliffe, and Heather D. Bracken-Grissom
Early Genotoxic and Cytotoxic Effects of the Toxic Dinoflagellate Prorocentrum lima in the Mussel Mytilus galloprovincialis, María Verónica Prego-Faraldo, Vanessa Valdiglesias, Blanca Laffon, Josefina Mendez, and Jose M. Eirin-Lopez
Avoiding Regions Symptomatic of Conformational and Functional Flexibility to Identify Antiviral Targets in Current and Future Coronaviruses, Jordon Rahaman and Jessica Siltberg-Liberles
Fast, ultra-trace detection of juvenile hormone III from mosquitoes using mass spectrometry, Cesar E. Ramirez, Marcela Nouzova, Paolo Benigni, Martin Quirke, Fernando G. Noriega, and Francisco Fernandez-Lima
Many species risk mountain top extinction long before they reach the top, Evan Rehm and Kenneth J. Feeley
Bushmeat hunting and extinction risk to the world's mammals, William J. Ripple, Katharine Abernethy, Matthew G. Betts, Guillaume Chapron, Rodolfo Dirzo, Mauro Galetti, Taal Levi, Peter A. Lindsey, David W. Macdonald, Brian Machovina, Thomas M. Newsome, Carlos A. Peres, Arian D. Wallach, Christopher Wolf, and Hillary Young
The characterization of macroH2A beyond vertebrates supports an ancestral origin and conserved role for histone variants in chromatin, Ciro Rivera-Casas, Rodrigo Gonzalez-Romero, Manjinder S. Cheema, Juan Ausio, and Jose M. Eirin-Lopez
Characterization of mussel H2A.Z.2: a new H2A.Z variant preferentially expressed in germinal tissues from Mytilus, Ciro Rivera-Casas, Rodrigo Gonzalez-Romero, Ángel Vizoso-Vazquez, Manjinder S. Cheema, M. Esperenza Cerdán, Josefina Méndez, Juan Ausió, and Jose M. Eirin-Lopez
The adaptive evolution of herbivory in freshwater systems, Jessica L. Sanchez and Joel C. Trexler
A childhood acute lymphoblastic leukemia genome-wide association study identifies novel sex-specific risk variants, Sandeep K. Singh, Philip J. Lupo, Michael E. Scheurer, Anshul Saxena, Amy E. Kennedy, Boubakari Ibrahimou, Manuel Alejandro Barbieri, Ken I. Mills, Jacob L. McCauley, Mehmet Fatih Okcu, and Mehmet Tevfik Dorak
Maximum swimming speeds of sailfish and three other large marine predatory fish species based on muscle contraction time and stride length: a myth revisited, Morten B.S. Svendsen, Paolo Domenici, Stefano Marras, Jens Krause, Kevin M. Boswell, Ivan Rodriguez-Pinto, Alexander D.M. Wilson, Ralf H.J.M. Kurvers, Paul E. Viblanc, Jean S. Finger, and John F. Steffensen
Prescribed burn creates pulsed effects on a wetland aquatic community, Louise S. Venne, Joel C. Trexler, and Peter C. Frederick
Allatostatin-C antagonizes the synergistic myostimulatory effect of allatotropin and serotonin in Rhodnius prolixus (Stal), María José Villalobos-Sambucaroa, Luis Animal Diambra, Fernando G. Noriega, and Jorge Rafael Ronderos
Persistence and diversity of directional landscape connectivity improves biomass pulsing in simulations of expanding and contracting wetlands, Simeon Yurek, Donald L. DeAngelis, Joel C. Trexler, Jessica A. Klassen, and Laurel G. Larsen
Faculty Publications from 2015
Pervasive Local-Scale Tree-Soil Habitat Association in a Tropical Forest Community, Elodie Allie, Raphael Pelissier, Julien Engel, Pascal Petronelli, Vincent Freycon, Vincent Deblauwe, Laure Soucemarianadin, Jean Weigel, and Christopher Baraloto
Predators help protect carbon stocks in blue carbon ecosystems, Trisha B. Atwood, Rod M. Connolly, Euan G. Ritchie, Catherine E. Lovelock, Michael R. Heithaus, Graeme C. Hays, James W. Fourqurean, and Peter I. Macreadie
Large-Scale Patterns of Turnover and Basal Area Change in Andean Forests, Selene Baez, Agustina Malizia, Julieta Carilla, Cecilia Blundo, Manuel Aguilar, Nikolay Aguirre, Zhofre Aquirre, Esteban Alvarez, Francisco Cuesta, Alvaro Duque, William Farfan-Rios, Karina Garcia-Cabrera, Ricardo Grau, Juergen Homeier, Reynaldo Linares-Palomino, Lucio R. Malizia, Omar Melo Cruz, and Kenneth J. Feeley
Cannot See the Flowers nor the Tree: Plants and the Pill, Bradley C. Bennett
Defending against pathogens - immunological priming and its molecular basis in a sea anemone, cnidarian, Tanya Brown and Mauricio Rodriguez-Lanetty
Using Scenario Planning to Evaluate the Impacts of Climate Change on Wildlife Populations and Communities in the Florida Everglades, Christopher P. Catano, Stephanie S. Romañach, James M. Beerens, Leonard G. Pearlstine, Laura A. Brandt, Kristen M. Hart, Frank J. Mazzotti, and Joel C. Trexler
Predation Risk, Resource Quality, and Reef Structural Complexity Shape Territoriality in a Coral Reef Herbivore, Laura B. Catano, Bridgette K. Gunn, Megan C. Kelley, and Deron E. Burkepile
Contrasting demographic history and gene flow patterns of two mangrove species on either side of the Central American Isthmus, Ivania Ceron-Souza, Elena G. Gonzalez, Andrea E. Schwarzbach, Dayana E. Salas-Leiva, Elsie Rivera-Ocasio, Nelson Toro-Perea, Eldredge Bermingham, and McMillan W. Owen
Inhibitory effect of Clitoria ternatea flower petal extract on fructose-induced protein glycation and oxidation-dependent damages to albumin in vitro, Poramin Chayaratanasin, Manuel Alejandro Barbieri, Nipattra Suanpairintr, and Sirichai Adisakwattana
Comparative Analysis of Wolbachia Genomes Reveals Streamlining and Divergence of Minimalist Two-Component Systems, Steen Christensen and Laura Renee Serbus
Farnesol-Like Endogenous Sesquiterpenoids in Vertebrates: The Probable but Overlooked Functional ?Inbrome? Anti-Aging Counterpart of Juvenile Hormone of Insects?, Arnold De Loof, Elisabeth Marchal, Crisalejandra Rivera-Perez, Fernando G. Noriega, and Liliane Schoofs
Where are the tropical plants? A call for better inclusion of tropical plants in studies investigating and predicting the effects of climate change, Kenneth J. Feeley, Miles R. Silman, and Alvaro Duque
Water quality, isoscapes and stoichioscapes of seagrasses indicate general P limitation and unique N cycling in shallow water benthos of Bermuda, James W. Fourqurean, S. A. Manuel, K. A. Coates, W. J. Kenworthy, and Joseph N. Boyer
Anthropogenic ecosystem fragmentation drives shared and unique patterns of sexual signal divergence among three species of Bahamian mosquitofish, Sean T. Giery, Craig A. Layman, and R. Brian Langerhans
Warming experiments elucidate the drivers of observed directional changes in tundra vegetation, Robert D. Hollister, Jeremy L. May, Kelseyann S. Kremers, Craig E. Tweedie, Steven F. Oberbauer, Jennifer A. Liebig, Timothy F. Botting, Robert T. Barrett, and Jessica L. Gregory
Quantity over quality: light intensity, but not red/far-red ratio, affects extrafloral nectar production in Senna mexicana var. chapmanii, Ian M. Jones and Suzanne Koptur
Effects of Slotted Water Control Structures on Nekton Movement within Salt Marshes, Matthew E. Kimball, Lawrence P. Rozas, Kevin M. Boswell, and James H. Cowan Jr.
The Influence of Host Plant Extrafloral Nectaries on Multitrophic Interactions: An Experimental Investigation, Suzanne Koptur, Ian M. Jones, and Jorge E. Pena
Diminished Response of Arctic Plants to Warming over Time, Kelseyann S. Kremers, Robert D. Hollister, and Steven F. Oberbauer
Climate Change May Alter Breeding Ground Distributions of Eastern Migratory Monarchs (Danaus plexippus) via Range Expansion of Asclepias Host Plants, Nathan P. Lemoine
Effects of in situ climate warming on monarch caterpillar (Danaus plexippus) development, Nathan P. Lemoine, Jillian N. Capdevielle, and John D. Parker
Ecosystem Resistance in the Face of Climate Change: a case study from the freshwater marshes of the Florida Everglades, Sparkle L. Malone, Cynthia Keough, Christina L. Staughammer, Michael G. Ryan, William J. Parton, Paulo Olivas, Steve F. Oberbauer, Jessica Schedlbauer, and Gregory Starr
Seagrass meadows as a globally significant carbonate reservoir, I. Mazarrasa, N. Marba, C. E. Lovelock, O. Serrano, P. S. Lavery, James W. Fourqurean, H. Kennedy, M. A. Mateo, D. Krause-Jensen, A. D. Steven L., and C. M. Duarte
A Novel Insight into Dehydroleucodine Mediated Attenuation of Pseudomonas aeruginosa Virulence Mechanism, Sushmita Mustafi, Maria Luisa Veisaga, L. A. Lopez, and Manuel A. Barbieri
Negative Feedbacks by Isoprenoids on a Mevalonate Kinase Expressed in the Corpora Allata of Mosquitoes, Pratik Nyati, Crisalejandra Rivera-Perez, and Fernando G. Noriega
Chloroplasts morphology investigation with diverse microscopy approaches and inter-specific variation in Laurencia species (Rhodophyta), Wladimir Costa Paradas, Leonardo Rodrigues Andrade, Leonardo Tavares Salgado, Ligia Collado-Vides, Renato Crespo Pereira, and Gilberto Menezes Amado-Filho
Losing your edge: climate change and the conservation value of range-edge populations, Evan M. Rehm, Paulo Olivas, James Stroud, and Kenneth J. Feeley
PP2A/B56 and GSK3/Ras suppress PKB activity during Dictyostelium chemotaxis, Marbelys Rodriguez Pino, Boris Castillo, Bohye Kim, and Lou W. Kim
Factors affecting individual foraging specialization and temporal diet stability across the range of a large “generalist” apex predator, Adam E. Rosenblatt, James C. Nifong, Michael R. Heithaus, Frank J. Mazzotti, Michael S. Cherkiss, Brian M. Jeffery, Ruth M. Elsey, Rachel A. Decker, Brian R. Silliman, Louis J. Guillette Jr., Russell H. Lowers, and Justin C. Larson
Reciprocal Transplant Reveals Trade-off of Resource Quality and Predation Risk in the Field, Clifton B. Ruehl and Joel C. Trexler
The transcription factors Ets1 and Sox10 interact during murine melanocyte development, Amy Saldana-Caboverde; Erasmo M. Perera; Dawn E. Watkins-Chow; Nancy F. Hansen; Meghana Vemulapalli; James C. Mullikin; NISC Compataive Sequencing Program, National Human Genome Research Institute; William J. Pavan; and Lidia Kos
The Impact of Host Diet on Wolbachia Titer in Drosophila, Laura R. Serbus, Pamela M. White, Jessica Pintado Silva, Amanda Rabe, Luis Teixeira, Roger Albertson, and William Sullivan
Body Size, Rather Than Male Eye Allometry, Explains Chrysomya megacephala (Diptera: Calliphoridae) Activity in Low Light, J. L. Smith, N. A. Palermo, Jamie C. Theobald, and Jeffrey D. Wells
Is a community still a community? Reviewing definitions of key terms in community ecology, James T. Stroud, Michael R. Bush, Mark C. Ladd, Robert J. Nowicki, Andrew A. Shantz, and Jennifer Sweatman
Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid, Victoria Suarez-Ulloa, Juan Fernandez-Tajes, Vanessa Aguiar-Pulido, Prego-Faraldo M. Veronica, Fernanda Florez-Barros, Alexia Sexto-Iglesias, Josefina Mendez, and Jose M. Eirin-Lopez
Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for alpha-Ketoglutarate Utilization, Gorakh Tatke, Hansi Kumari, Eugenia Silva-Herzog, Lourdes Ramirez, and Kalai Mathee
Component-specific dynamics of riverine mangrove CO2 efflux in the Florida coastal Everglades, Tiffany Troxler-Gann, Jordan G. Barr, Jose D. Fuentes, Victor Engel, Gordon Anderson, Christopher Sanchez, David Lagomasino, René M. Price, and Stephen E. Davis
Allatotropin Modulates Myostimulatory and Cardioacceleratory Activities in Rhodnius prolixus (Stal), Maria Jose Villalobos-Sambucaro, Alicia Nieves Lorenzo-Figueiras, Fernando Luis Riccillo, Luis Anibal Diambra, Fernando Gabriel Noriega, and Jorge Rafael Ronderos
Methyl Farnesoate Plays a Dual Role in Regulating Drosophila Metamorphosis, Di Wen, Crisalejandra Rivera-Perez, Mohamed Abdou, Qiangqiang Jia, Qianyu He, Xi Liu, Ola Zyaan, Jingjing Xu, William G. Bendena, Stephen S. Tobe, Fernando G. Noriega, Subba R. Palli, Jian Wang, and Sheng Li
Combined Loss of Tet1 and Tet2 Promotes B Cell, but Not Myeloid Malignancies, in Mice, Zhigang Zhao, Li Chen, Meelad M. Dawlaty, Feng Pan, Ophelia Weeks, Yuan Zhou, Zeng Cao, Hui Shi, Jiapeng Wang, Li Lin, Shi Chen, Weiping Yuan, Zhaohui Qin, Hongyu Ni, Stephen D. Nimer, Feng-Chun Yang, Rudolf Jaenisch, and Peng Jin
Faculty Publications from 2014
Effect of beta 1,3 glucan in stress responses of the pencilfish (Nannostomus trifasciatus) during transport within the rio Negro basin, Janessa S. Abreu, Richard P. Brinn, Levy C. Gomes, Dawn Michelle McComb, Bernardo Baldisserott, Sérgio F. Zaiden, Elisabeth C. Urbinati, and Jaydione L. Marcon
Ecosystem fragmentation drives increased diet variation in an endemic livebearing fish of the Bahamas, Marcio S. Araujo, R. Brian Langerhans, Sean T. Giery, and Craig A. Layman
Understanding Coastal Carbon Cycling by Linking Top- Down and Bottom-Up Approaches, Jordan G. Barr, Tiffany Troxler-Gann, and Raymond G. Najjar
Ocean Acidification Outweighs Nutrient Effects in Structuring Seagrass Epiphyte Communities, Justin E. Campbell and James W. Fourqurean
Biogeochemical Effects of Simulated Sea Level Rise on Carbon Loss in an Everglades Mangrove Peat Soil, Lisa G. Chambers, Stephen E. Davis, Tiffany Troxler-Gann, Joseph N. Boyer, Alan Downey-Wall, and Leanord J. Scinto
Cascading effects of a highly specialized beech-aphid-fungus interaction on forest regeneration, Susan C. Cook-Patton, Lauren Maynard, Nathan P. Lemoine, Jessica Shue, and John D. Parker
Two distinct microbial communities revealed in the sponge Cinachyrella, Marie L. Cuvelier, Emily Blake, Rebecca Mulheron, Peter J. McCarthy, Patricia Blackwelder, Rebecca L. Vega Thurber, and Jose V. Lopez
The dangers of carbon-centric conservation for biodiversity: a case study in the Andes, Alvaro Duque, Kenneth J. Feeley, Edersson Cabrera, Ricardo Callejas, and Alvaro Idarraga
There are many barriers to species’ migrations, Kenneth J. Feeley, Evan M. Rehm, and James T. Stroud
The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula, Maren L. Friesen, Eric J.B. von Wettberg, Mounawer Badri, Ken S. Moriuchi, Fathi Barhoumi, Peter L. Chang, Sonia Cuellar-Ortiz, Matilde A. Cordeiro, Wendy T. Vu, Soumaya Arraouadi, Naceur Djebali, Kais Zribi, Yazid Badri, Stephanie S. Porter, Mohammed Elarbi Aouani, Douglas R. Cook, Sharon Y. Strauss, and Sergey V. Nuzhdin
Boundary Effects on Benthic Microbial Phosphorus Concentrations and Diatom Beta Diversity in a Hydrologically-modified, Nutrient-limited Wetland, Evelyn E. Gaiser, Pamela Sullivan, Franco A.C. Tobias, Andrew J. Bramburger, and Joel C. Trexler
Science Cafe Course: An Innovative Means of Improving Communication Skills of Undergraduate Biology Majors, Anna Goldina and Ophelia I. Weeks