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Faculty Publications from 2010

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Students’ Content Preferences for Taking Online Courses, Mandayam Thirunarayanan, Ivette Bayo, and Ryan Slater

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Students’ Content Preferences for Taking Online Courses, Mandayam Thirunarayanan, Ivette Bayo, and Ryan Slater

Hydrological drivers of wetland vegetation community distribution within Everglades National Park, Florida, M. Jason Todd, R. Muneepeerakul, D. Pumo, S. Azaele, F. Miralles-Wilhelm, A. Rinaldo, and I. Rodriguez-Iturbe

Biogeochemical Contributions of Tree Islands to Everglades Wetland Landscape Nitrogen Cycling During Seasonal Inundation, Tiffany Troxler-Gann and Dan Childers

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Lithium enhances cortical mRNA expression in ovariectomized C57BL/6J mice, James J. Valdés, Franchesca M. Ramirez, Barbara Juarez, and Ophelia Weeks

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speCombined estradiol and lithium increase ER-α mRNA in embryonic C57BL/6J primary hippocampal cultures, James J. Valdés and Ophelia Weeks

Mother–offspring isotope fractionation in two species of placentatrophic sharks, Jeremy J. Vaudo, P. Matich, and Michael R. Heithaus

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How Anthocyanin Mutants Respond to Stress: the Need to Distinguish Between Stress Tolerance and Maximal Vigour, Eric JB von Wettberg, Maureen L. Stanton, and Justen B. Whittall

Distribution of Diatoms and Development of Diatom-Based Models for Inferring Salinity and Nutrient Concentrations in Florida Bay and Adjacent Coastal Wetlands of South Florida (USA), Anna Wachnicka, Evelyn E. Gaiser, Laurel Collins, Thomas J. Frankovich, and Joseph N. Boyer

Determination of vertical and horizontal pathways of injected fresh wastewater into a deep saline aquifer (Florida, USA) using natural chemical tracers, Virginia Walsh and René M. Price

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The Engaged University: Providing a Platform for Research That Transforms Society, Ali Whitmer, Laura Ogden, John Lawton, Pat Sturner, Peter M. Groffman, Laura Schnieder, David Hart, Benjamin Halpern, William Schlesinger, Steve Raciti, Sonia Ortega, Lindsey Rustad, Steward TA Pickett, and Mary Killilea

Faculty Publications from 2009

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The GAAS Metagenomic Tool and Its Estimations of Viral and Microbial Average Genome Size in Four Major Biomes, Florent E. Angly, Dana Willner, Alejandra Prieto-Davo, Robert A. Edwards, Robert Schmieder, Rebecca Vega-Thurber, Dionsios A. Antonopoulos, Katie Barott, Matthew T. Cottrell, Christelle Desnues, Elizabeth A. Dinsdale, Mike Furlan, Matthew Haynes, Matthew R. Henn, Yongfei Hu, David L. Kirchman, Tracey McDole, John D. McPherson, Folker Meyer, R. Michael Miller, Egbert Mundt, Robert K. Naviaux, Beltran Rodriguez-Mueller, Rick Stevens, Linda Wegley, Lixin Zhang, Baoli Zhu, and Forest Rohwer

Unravelling the evolution of autumn colours: an interdisciplinary approach., Marco Archetti, Thomas F. Döring, Snorre B. Hagen, Nicole M. Hughes, Simon R. Leather, David W. Lee, Simcha Lev-Yadun, Yiannis Manetas, Helen J. Ougham, Paul G. Schaberg, and Howard Thomas

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Stable isotopes reveal complex changes in trophic relationships following nutrient addition in a coastal marine ecosystem, Anna R. Armitage and James W. Fourqurean

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Comparative transcriptome analyses of Pseudomonas aeruginosa, Deepak Balasubramania and Kalai Mathee

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Comparative transcriptome analyses of Pseudomonas aeruginosa, Deepak Balasubramanian and Kalai Mathee

Stream dissolved organic matter bioavailability and composition in watersheds underlain with discontinuous permafrost, Kelly L. Balcarczyk, Jeremy B. Jones Jr., Rudolf Jaffe´, and Nagamitsu Maie

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Calcium fluxes in Hoplosternum littorale (tamoatá) exposed to different types of Amazonian waters, Bernardo Baldisserotto, Carlos Eduardo Copatti, Levy Carvalho Gomes, Edsandra Campos Chagas, Richard P. Brinn, and Rodrigo Roubach

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Physiological responses of red mangroves to the climate in the Florida Everglades, Jordan G. Barr, Jose D. Fuentes, Vic Engel, and Joseph C. Zieman

Phytoplankton bloom status: Chlorophyll a biomass as an indicator of water quality condition in the southern estuaries of Florida, USA, Joseph N. Boyer, Christopher R. Kelble, Peter B. Ortner, and David T. Rudnick

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Modeling instruction: Positive attitudinal shifts in introductory physics measured with CLASS, Eric Brewe, Laird Kramer, and George O'Brien

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Climatic Controls on Phytoplankton Biomass in a Sub-tropical Estuary, Florida Bay, USA, Henry O. Briceño and Joseph N. Boyer

Pink shrimp as an indicator for restoration of everglades ecosystems, Joan A. Browder and Michael B. Robblee

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Serial evolutionary networks of within-patient HIV-1 sequences reveal patterns of evolution of X4 strains, Patrica Buendia and Giri Narasimhan

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Interspecific variation in the elemental and stable isotope content of seagrasses in South Florida, Justin E. Campbell and James W. Fourqurean

Nonlinear Flow in Karst Formations, David A. Chin, René M. Price, and Vincent J. Difrenna

The Ideas Lab Concept, Assembling the Tree of Life, and AVAToL, Timothy Collins, Maureen Kearney, and David Maddison

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Response Inhibition and ADHD Traits: Correlates and Heritability in a Community Sample, J. Crosbie, P. Arnold, A. Paterson, J. Swanson, A. Dupuis, X. Li, J. Shan, T. Goodale, C. Tam, L. J. Strug, and R. J. Schachar

A conceptual ecological model to facilitate understanding the role of invasive species in large-scale ecosystem restoration, Robert F. Doren, Jennifer H. Richards, and John C. Volin

Ecological indicators for system-wide assessment of the greater everglades ecosystem restoration program, Robert F. Doren, Joel C. Trexler, Andrew D. Gottlieb, and Mathew C. Harwell

Invasive exotic plant indicators for ecosystem restoration: An example from the Everglades restoration program, Robert F. Doren, John C. Volin, and Jennifer H. Richards

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A k2A-positive Klebsiella pneumoniae causes liver and brain abscess in a Saint Kitt’s man, Melissa S. Doud, Reni Grimes-Zeppegno, Enrique Molina, Nancimae Miller, Danajeyan Balachandar, Lisa Schneper, Robert Poppiti, and Kalai Mathee

Ecuador's Yasuni Biosphere Reserve: a brief modern history and conservation challenges, M Finer, V Vijay, F Ponce, CN Jenkins, and TR Kahn

Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida, James W. Fourqurean, Thomas J. Smith III, Jennifer Possley, Timothy M. Collins, David W. Lee, and Sandra Namoff

Nutrient effects on seagrass epiphyte community structure in Florida Bay, Thomas A. Frankovich, Anna R. Armitage, Anna Honorata Wachnicka, Evelyn E. Gaiser, and James W. Fourqurean

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The White Ibis and Wood Stork as indicators for restoration of the everglades ecosystem, Peter Frederick, Dale E. Gawlik, John C. Ogden, Mark I. Cook, and Michael Lusk

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Periphyton as an indicator of restoration in the Everglades, Evelyn E. Gaiser

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Multidecadal climate oscillations detected in a transparency record from a subtropical Florida lake, Evelyn E. Gaiser, Nancy D. Deyrup, Roger W. Bachmann, Larry D. Battoe, and Hilary M. Swain

Effects of climate variability on transparency and thermal structure in subtropical, monomictic Lake Annie, Florida, Evelyn E. Gaiser, Nancy D. Deyrup, Roger W. Bachmann, Larry E. Battoe, and Hilary M. Swain

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Florida Bay: Water quality status and trends, historic and emerging algal bloom problems, Patricia M. Glibert, Cynthia A. Heil, David T. Rudnick, Christopher J. Madden, Joseph N. Boyer, and Stephen P. Kelley

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Increased d-amino acid oxidase expression in the bilateral hippocampal CA4 of schizophrenic patients: a post-mortem study, Gregor Habl, Mathias Zink, Georg Petroianu, Manfred Bauer, Thomas Schneider-Axmann, Martina von Wilmsdorff, Peter Falkai, Fritz A. Henn, and Andrea Schmitt

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Arsenic transport by zebrafish aquaglyceroporins, Mohamad Hamdi, Marco A. Sanchez, Lauren C. Beene, Qianyong Liu, Scott M. Landfear, Barry P. Rosen, and Zijuan Liu

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Submerged aquatic vegetation and bulrush in Lake Okeechobee as indicators of greater Everglades ecosystem restoration, Mathew C. Harwell and Bruce Sharfstein

Physical factors influencing the distribution of a top predator in a subtropical oligotrophic estuary, Michael R. Heithaus, Bryan K. Delius, Aaron J. Wirsing, and Meagan M. Dunphy-Daly

Phosphorus Availability and Salinity Control Productivity and Demography of the Seagrass Thalassia testudinum in Florida Bay, D. A. Herbert and James W. Fourqurean

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Immunostaining for allatotropin and allatostatin-A and -C in the mosquitoes Aedes aegypti and Anopheles albimanus, Salvador Hernández-Martínez, Yiping Li, Humberto Lanz-Mendoza, Mario H. Rodriguez, and Fernando G. Noriega

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Web Based Bicycle Trip Planning for Broward County, Florida, Hartwig H. Hochmair and Zhaohui (Jennifer) Fu

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Diabetes Self Management: Are Cuban Americans Receiving Quality Health Care?, Fatma G. Huffman, Joan A. Vaccaro, Subrara Nath, and Gustavo G. Zarini

Changes in Community Structure of Sediment Bacteria Along the Florida Coastal Everglades Marsh–Mangrove–Seagrass Salinity Gradient, Makoto Ikenaga, Rafael Guevara, Amanda L. Dean, Cristina Pisani, and Joseph N. Boyer

Expansion of the global terrestrial protected area system, CN Jenkins and L Joppa

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Effect of Surfactants on the Structure and Morphology of Magnesium Borate Hydroxide Nanowhiskers Synthesized by Hydrothermal Route, Latha Kumari, WZ Li, Shrinivas Kulkarni, KH Wu, Wei Chen, Chunlei Wang, Charles H. Vannoy, and Roger M. Leblanc

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Three birds with one stone: moas, heteroblasty and the New Zealand flora, David W. Lee and Kevin Gould

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Feature Selection and Classification of MAQC-II Breast Cancer and Multiple Myeloma Microarray Gene Expression Data, Qingzhong Liu, Andrew H. Sung, Zhongxue Chen, Jianzhong Liu, Xudong Huang, and Youing Deng

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Roseate spoonbill reproduction as an indicator for restoration of the Everglades and the Everglades estuaries, Jerome J. Lorenz, Brynne Langan-Mulrooney, Peter E. Frezza, Rebecca G. Harvey, and Frank J. Mazzotti

Ecological indicators for assessing and communicating seagrass status and trends in Florida Bay, Christopher J. Madden, David T. Rudnick, Amanda A. MacDonald, Kevin M. Cunniff, and James W. Fourqurean

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Carbon (d13c) and Nitrogen (d15n) Isotopic Discrimination in Mangroves in Florida Coastal Everglades as a Function of Environmental Stress, Josè Ernesto Mancera- Pineda, Robert R. Twilley, and Victor H. Rivera-Monroy

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Circadian and Social Cues Regulate Ion Channel Trafficking, Michael Markham, M. Lynne McAnelly, Philip K. Stoddard, and Harold H. Zakon

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Species Diversity and Conservation Status of Amphibians in Madre De Dios, Southern Peru, Rudolf Von May, Karen Siu-Ting, Jennifer M. Jacobs, Margarita Medina-Muller, Giuseppe Gagliardi, Lily O. Rodriguez, and Maureen A. Donnelly

Alligators and crocodiles as indicators for restoration of Everglades ecosystems, Frank J. Mazzotti, G. Ronnie Best, Laura A. Brandt, Michael S. Cherkiss, Brian M. Jeffery, and Kenneth G. Rice

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Evaporation Estimation of Rift Valley Lakes: Comparison of Models, Assefa M. Melesse, Wossenu Abtew, and Tibebe Dessalegne

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How do psychiatric drugs work?, Joanna Moncrieff and David Cohen

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Sensors Best Paper Award 2013, Vittorio M.N. Passaro, W. Rudolf Seitz, Assefa M. Melesse, Alexander Star, and Ophelia Han

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Monitoring by HPLC of Chamomile Flavonoids Exposed to Rat Liver Microsomal Metabolism, Georg Petroianu, Eva Szoke, Huba Kalàsz, Peter Szegi, Rudolf Laufer, Bernadett Benko, Ferenc Darvas, and Kornelia Tekes

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Animal pigment bilirubin discovered in plants, Cary Pirone, J. Martin E. Quirke, Horacio A. Priestap, and David W. Lee

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Brain abnormalities in dyslexic subjects, Aníbal Puente, Virginia Jiménez, and Alfredo Ardilla

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Antipredator Responses by Native Mosquitofish to Non-Native Cichlids: An Examination of the Role of Prey Naiveté, Jennifer S. Rehage, Katherine L. Dunlop, and William F. Loftus

Chilling damage in a changing climate in coastal landscapes of the subtropical zone: a case study from south Florida, Michael S. Ross, Pablo L. Ruiz, Jay P. Sah, and Erin j. Hanan

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Tree Mortality following Prescribed Fire and a Storm Surge Event in Slash Pine (Pinus elliottii var. densa) Forests in the Florida Keys, USA, Jay P. Sah, Michael S. Ross, James R. Snyder, and Danielle E. Ogurcak

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Disaster Risk Reduction, DD04 - Study Guide and Course Text, Juan Pablo Sarmiento

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Validation study of the Colorado Learning Attitudes about Science Survey at a Hispanic-serving institution, Vashti Sawtelle, Eric Brewe, and Laird Kramer

Photochemical alteration of 3-oxygenated triterpenoids: Implications for the origin of 3,4-seco-triterpenoids in sediments, Bernd R.T. Simoneit, Yunping Xu, Renato R. Neto, Joshua B. Cloutier, and Rudolf Jaffe´

Determining Spatial and Temporal Inputs of Freshwater, Including Submarine Groundwater Discharge, to a Subtropical Estuary Using Geochemical Tracers, Biscayne Bay, South Florida, Jeremy C. Stalker, René M. Price, and Peter K. Swart

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Immigrant-Established Resident Interactions in Miami, Florida, Alex Stepick and Carol Dutton Stepwick

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Androgens Regulate Prostate Cancer Cell Growth via an AMPK-PGC-1?-Mediated Metabolic Switch, Jayantha B. B. Tennakoon, Yan Shi, Jenny J. Han, Efrosini Tsouko, Mark A. White, Alan R. Burns, Aijun Zhang, Xuefeng Xia, Olga R. Ilkayeva, Li Xin, Michael M. Ittmann, Ferenc G. Rick, Andrew V. Schally, and Daniel E. Frigo

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Technology as a 'Flotation Device', Mandayam Thirunarayanan and Taylor Campbell

Aquatic fauna as indicators for Everglades restoration: Applying dynamic targets in assessments, Joel C. Trexler and Charles W. Goss

Eastern oysters (Crassostrea virginica) as an indicator for restoration of Everglades Ecosystems, Aswani K. Volety, Michael Savarese, S. Gregory Tolley, William S. Arnold, Patricia Sime, Patricia Goodman, Robert H. Chamberlain, and Peter H. Doering

Hurricane Wilma’s impact on overall soil elevation and zones within the soil profile in a mangrove forest, Kevin R.T. Whelan, Thomas J. Smith, Gordon H. Anderson, and Michelle L. Oullette

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On the Existence and Uniqueness of the Maximum Likelihood Estimators of Normal and Lognormal Population Parameters with Grouped Data, Jin Xia, Jie Mi, and Yan Yan Zhou

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On the Existence and Uniqueness of the Maximum Likelihood Estimators of Normal and Lognormal Population Parameters with Grouped Data, Jin Xia, Jie Mi, and YanYan Zhou

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Parents’ Reactions at 24–48 Hours after a Preschool Child’s Head Injury, JoAnne M. Youngblut, Dorothy Brooten, and John Kuluz

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Child Care Use by Low-Income Single Mothers of Preschoolers Born Preterm Versus Those of Preschoolers Born Full Term, JoAnne M. Youngblut, Dorothy Brooten, Sandra L. Lobar, Laura Hernandez, and Mary McKenry

Submissions from 2008

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Disaster Preparedness and the Chronic Disease Needs of Vulnerable Older Adults, Nancy Aldrich and William F. Benson

Mapping and exploring the distribution of the Vulnerable grey-winged cotinga Tijuca condita, MAS Alves, SL Pimm, A Storni, MA Raposo, Brooke, G Harris, A Foster, and CN Jenkins

The Development of Perception in a Multimodal Environment, Lorraine E. Bahrick

Infant Discrimination of Faces in Naturalistic Events: Actions Are More Salient Than Faces, Lorraine E. Bahrick and Lisa C. Newell

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Cyanobacterial Toxins as Allelochemicals with Potential Applications as Algaecides, Herbicides and Insecticides, John P. Berry, Miroslav Gantar, Mario H. Perez, Gerald Berry, and Fernando G. Noriega

Mangrove production and carbon sinks: A revision of global budget estimates, Steven Bouillon, Alberto V. Borges, Edward Castañeda-Moya, Karen Diele, Thorsten Dittmar, Norman C. Duke, Erik Kristensen, Shing Y. Lee, Cyril Marchand, Jack J. Middleburg, Victor H. Rivera-Monroy, Thomas J. Smith III, and Robert R. Twilley

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Tropical Deforestation, Community Forests, and Protected Areas in the Maya Forest, David Barton Bray, Elvira Duran, Victor Hugo Ramos, Jean-Francois May, Alejandro Velazquez, Roan Balas McNab, Deborah Barry, and Jeremy Radachowsky

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A spatial-temporal analysis of section 404 wetland permitting in Texas and Florida: Thirteen years of impact along the coast, Samuel D. Brody, Steven E. Davis III, Wesley H. Highfield, and Sarah P. Bernhardt

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Attack DistributionModeling and Its Applications in Sensor Network Security, Xiangqian Chen, Kia Makki, Kang Yen, and Niki Pissinou

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Integrated electromyogram and eye-gaze tracking cursor control system for computer users with motor disabilities, Craig A. Chin, Armando Barreto, J. Gualberto Cremades, and Malek Adjouadi

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Identification of a hydrodynamic threshold in karst rocks from the Biscayne Aquifer, south Florida, USA, Vincent J. DiFrenna, René M. Price, and M. Reza Savabi

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Approaches to analyse dynamic microbial communities such as those seen in cystic fibrosis lung, Melissa Doud, Erliang Zeng, Lisa Schneper, Giri Narasimhan, and Kalai Mathee

Oil and Gas Projects in the Western Amazon: Threats to Wilderness, Biodiversity, and Indigenous Peoples, M Finer, CN Jenkins, SL Pimm, B Keane, and C Ross

Comment on Estimating Ecological Thresholds for Phosphorus in the Everglades, Evelyn E. Gaiser, Robert F. Doren, Paul V. McCormick, Susan Newman, Jennifer H. Richards, and Joel C. Trexler

Ecosystem Structure and Function Still Altered Two Decades After Short-Term Fertilization of a Seagrass Meadow, Darrell A. Herbert and James W. Fourqurean

Protection of mammal diversity in Central America, CN Jenkins and C Giri

Macroinvertebrate community response to eutrophication in an oligotrophic wetland: An in situ mesocosm experiment, Shawn E. Liston, Susan Newman, and Joel C. Trexler

Mangrove tannins in aquatic ecosystems: Their fate and possible influence on dissolved organic carbon and nitrogen cycling, Nagamitsu Maie, Oliva Pisani, and Rudolf Jaffe´