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Faculty Publications from 2015

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Pervasive Local-Scale Tree-Soil Habitat Association in a Tropical Forest Community, Elodie Allie, Raphael Pelissier, Julien Engel, Pascal Petronelli, Vincent Freycon, Vincent Deblauwe, Laure Soucemarianadin, Jean Weigel, and Christopher Baraloto

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Large-Scale Patterns of Turnover and Basal Area Change in Andean Forests, Selene Baez, Agustina Malizia, Julieta Carilla, Cecilia Blundo, Manuel Aguilar, Nikolay Aguirre, Zhofre Aquirre, Esteban Alvarez, Francisco Cuesta, Alvaro Duque, William Farfan-Rios, Karina Garcia-Cabrera, Ricardo Grau, Juergen Homeier, Reynaldo Linares-Palomino, Lucio R. Malizia, Omar Melo Cruz, and Kenneth J. Feeley

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Defending against pathogens - immunological priming and its molecular basis in a sea anemone, cnidarian, Tanya Brown and Mauricio Rodriguez-Lanetty

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Predation Risk, Resource Quality, and Reef Structural Complexity Shape Territoriality in a Coral Reef Herbivore, Laura B. Catano, Bridgette K. Gunn, Megan C. Kelley, and Deron E. Burkepile

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Contrasting demographic history and gene flow patterns of two mangrove species on either side of the Central American Isthmus, Ivania Ceron-Souza, Elena G. Gonzalez, Andrea E. Schwarzbach, Dayana E. Salas-Leiva, Elsie Rivera-Ocasio, Nelson Toro-Perea, Eldredge Bermingham, and McMillan W. Owen

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Inhibitory effect of Clitoria ternatea flower petal extract on fructose-induced protein glycation and oxidation-dependent damages to albumin in vitro, Poramin Chayaratanasin, Manuel Alejandro Barbieri, Nipattra Suanpairintr, and Sirichai Adisakwattana

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Comparative Analysis of Wolbachia Genomes Reveals Streamlining and Divergence of Minimalist Two-Component Systems, Steen Christensen and Laura Renee Serbus

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Are We Filling the Data Void? An Assessment of the Amount and Extent of Plant Collection Records and Census Data Available for Tropical South America, Kenneth Feeley

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Water quality, isoscapes and stoichioscapes of seagrasses indicate general P limitation and unique N cycling in shallow water benthos of Bermuda, James W. Fourqurean, S. A. Manuel, K. A. Coates, W. J. Kenworthy, and Joseph N. Boyer

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Anthropogenic ecosystem fragmentation drives shared and unique patterns of sexual signal divergence among three species of Bahamian mosquitofish, Sean T. Giery, Craig A. Layman, and R. Brian Langerhans

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Warming experiments elucidate the drivers of observed directional changes in tundra vegetation, Robert D. Hollister, Jeremy L. May, Kelseyann S. Kremers, Craig E. Tweedie, Steven F. Oberbauer, Jennifer A. Liebig, Timothy F. Botting, Robert T. Barrett, and Jessica L. Gregory

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Quantity over quality: light intensity, but not red/far-red ratio, affects extrafloral nectar production in Senna mexicana var. chapmanii, Ian M. Jones and Suzanne Koptur

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Effects of Slotted Water Control Structures on Nekton Movement within Salt Marshes, Matthew E. Kimball, Lawrence P. Rozas, Kevin M. Boswell, and James H. Cowan Jr.

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The Influence of Host Plant Extrafloral Nectaries on Multitrophic Interactions: An Experimental Investigation, Suzanne Koptur, Ian M. Jones, and Jorge E. Pena

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Diminished Response of Arctic Plants to Warming over Time, Kelseyann S. Kremers, Robert D. Hollister, and Steven F. Oberbauer

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Climate Change May Alter Breeding Ground Distributions of Eastern Migratory Monarchs (Danaus plexippus) via Range Expansion of Asclepias Host Plants, Nathan P. Lemoine

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Effects of in situ climate warming on monarch caterpillar (Danaus plexippus) development, Nathan P. Lemoine, Jillian N. Capdevielle, and John D. Parker

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Seagrass meadows as a globally significant carbonate reservoir, I. Mazarrasa, N. Marba, C. E. Lovelock, O. Serrano, P. S. Lavery, James W. Fourqurean, H. Kennedy, M. A. Mateo, D. Krause-Jensen, A. D. Steven L., and C. M. Duarte

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A Novel Insight into Dehydroleucodine Mediated Attenuation of Pseudomonas aeruginosa Virulence Mechanism, Sushmita Mustafi, Maria Luisa Veisaga, L. A. Lopez, and Manuel A. Barbieri

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Negative Feedbacks by Isoprenoids on a Mevalonate Kinase Expressed in the Corpora Allata of Mosquitoes, Pratik Nyati, Crisalejandra Rivera-Perez, and Fernando G. Noriega

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Chloroplasts morphology investigation with diverse microscopy approaches and inter-specific variation in Laurencia species (Rhodophyta), Wladimir Costa Paradas, Leonardo Rodrigues Andrade, Leonardo Tavares Salgado, Ligia Collado-Vides, Renato Crespo Pereira, and Gilberto Menezes Amado-Filho

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Losing your edge: climate change and the conservation value of range-edge populations, Evan M. Rehm, Paulo Olivas, James Stroud, and Kenneth J. Feeley

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The Impact of Host Diet on Wolbachia Titer in Drosophila, Laura R. Serbus, Pamela M. White, Jessica Pintado Silva, Amanda Rabe, Luis Teixeira, Roger Albertson, and William Sullivan

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Body Size, Rather Than Male Eye Allometry, Explains Chrysomya megacephala (Diptera: Calliphoridae) Activity in Low Light, J. L. Smith, N. A. Palermo, Jamie C. Theobald, and Jeffrey D. Wells

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Is a community still a community? Reviewing definitions of key terms in community ecology, James T. Stroud, Michael R. Bush, Mark C. Ladd, Robert J. Nowicki, Andrew A. Shantz, and Jennifer Sweatman

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Unbiased high-throughput characterization of mussel transcriptomic responses to sublethal concentrations of the biotoxin okadaic acid, Victoria Suarez-Ulloa, Juan Fernandez-Tajes, Vanessa Aguiar-Pulido, Prego-Faraldo M. Veronica, Fernanda Florez-Barros, Alexia Sexto-Iglesias, Josefina Mendez, and Jose M. Eirin-Lopez

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Pseudomonas aeruginosa MifS-MifR Two-Component System Is Specific for alpha-Ketoglutarate Utilization, Gorakh Tatke, Hansi Kumari, Eugenia Silva-Herzog, Lourdes Ramirez, and Kalai Mathee

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Allatotropin Modulates Myostimulatory and Cardioacceleratory Activities in Rhodnius prolixus (Stal), Maria Jose Villalobos-Sambucaro, Alicia Nieves Lorenzo-Figueiras, Fernando Luis Riccillo, Luis Anibal Diambra, Fernando Gabriel Noriega, and Jorge Rafael Ronderos

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Methyl Farnesoate Plays a Dual Role in Regulating Drosophila Metamorphosis, Di Wen, Crisalejandra Rivera-Perez, Mohamed Abdou, Qiangqiang Jia, Qianyu He, Xi Liu, Ola Zyaan, Jingjing Xu, William G. Bendena, Stephen S. Tobe, Fernando G. Noriega, Subba R. Palli, Jian Wang, and Sheng Li

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Combined Loss of Tet1 and Tet2 Promotes B Cell, but Not Myeloid Malignancies, in Mice, Zhigang Zhao, Li Chen, Meelad M. Dawlaty, Feng Pan, Ophelia Weeks, Yuan Zhou, Zeng Cao, Hui Shi, Jiapeng Wang, Li Lin, Shi Chen, Weiping Yuan, Zhaohui Qin, Hongyu Ni, Stephen D. Nimer, Feng-Chun Yang, Rudolf Jaenisch, and Peng Jin

Faculty Publications from 2014

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Ecosystem fragmentation drives increased diet variation in an endemic livebearing fish of the Bahamas, Marcio S. Araujo, R. Brian Langerhans, Sean T. Giery, and Craig A. Layman

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Cascading effects of a highly specialized beech-aphid-fungus interaction on forest regeneration, Susan C. Cook-Patton, Lauren Maynard, Nathan P. Lemoine, Jessica Shue, and John D. Parker

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Two distinct microbial communities revealed in the sponge Cinachyrella, Marie L. Cuvelier, Emily Blake, Rebecca Mulheron, Peter J. McCarthy, Patricia Blackwelder, Rebecca L. Vega Thurber, and Jose V. Lopez

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The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula, Maren L. Friesen, Eric J.B. von Wettberg, Mounawer Badri, Ken S. Moriuchi, Fathi Barhoumi, Peter L. Chang, Sonia Cuellar-Ortiz, Matilde A. Cordeiro, Wendy T. Vu, Soumaya Arraouadi, Naceur Djebali, Kais Zribi, Yazid Badri, Stephanie S. Porter, Mohammed Elarbi Aouani, Douglas R. Cook, Sharon Y. Strauss, and Sergey V. Nuzhdin

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Morphological and physiological responses of seagrasses (Alismatales) to grazers (Testudines: Cheloniidae) and the role of these responses as grazing patch abandonment cues, Elizabeth A. Lacey, Ligia Collado-Vides, and James W. Fourqurean

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Variable effects of temperature on insect herbivory, Nathan P. Lemoine, Deron E. Burkepile, and John D. Parker

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El Nino Southern Oscillation (ENSO) Enhances CO2 Exchange Rates in Freshwater Marsh Ecosystems in the Florida Everglades, Sparkle L. Malone, Christina L. Staudhammer, Steven F. Oberbauer, Paulo Olivas, Michael G. Ryan, Jessica L. Schedlbauer, Henry W. Loescher, and Gregory Starr

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Unprecedented evidence for high viral abundance and lytic activity in coral reef waters of the South Pacific Ocean, Jerome P. Payet, Ryan McMinds, Deron E. Burkepile, and Rebecca L. Thurber Vega

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Exploring Germplasm Diversity to Understand the Domestication Process in Cicer spp. Using SNP and DArT Markers, Manish Roorkiwal, Eric J. von Wettberg, Hari D. Upadhyaya, Emily Warschefsky, Abhishek Rathore, and Rajeev K. Varshney

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Regional differences in the age and growth of red snapper (Lutjanus campechanus) in the US Gulf of Mexico, Courtney R. Saari, James H. Cowan Jr., and Kevin M. Boswell

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Using phylogenetically-informed annotation (PIA) to search for light-interacting genes in transcriptomes from non-model organisms, Daniel I. Speiser, M. Sabrina Pankey, Alexander K. Zaharoff, Barbara A. Battelle, Heather D. Bracken-Grissom, Jesse W. Breinholt, Seth M. Bybee, Thomas W. Cronin, Anders Garm, Annie R. Lindgren, Nipam H. Patel, Megan L. Porter, Meredith E. Protas, Ajna S. Rivera, Jeanne M. Serb, Kirk S. Zigler, Keith A. Crandall, and Todd H. Oakley

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Quorum Sensing Signal Production and Microbial Interactions in a Polymicrobial Disease of Corals and the Coral Surface Mucopolysaccharide Layer, Beth L. Zimmer, Amanda L. May, Chinmayee D. Bhedi, Stephen P. Dearth, Carson W. Prevatte, Zoe Pratte, Shawn R. Campagna, and Laurie L. Richardson

Faculty Publications from 2013

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Allatotropin: An Ancestral Myotropic Neuropeptide Involved in Feeding, Maria Eugenia Alzugaray, Mariana Laura Adami, Luis Anibal Diambra, Salvado Hernandez-Martinez, Christina Damborenea, Fernando Gabriel Noriega, and Jorge Rafael Ronderos

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Space-for-Time Substitution Works in Everglades Ecological Forecasting Models, Amanda I. Banet and Joel C. Trexler

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Space-for-Time Substitution Works in Everglades Ecological Forecasting Models, Amanda I. Banet and Joel C. Trexler

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A comprehensive and integrative reconstruction of evolutionary history for Anomura (Crustacea: Decapoda), Heather D. Bracken-Grissom, Maren E. Cannon, Patricia Cabezas, Rodney M. Feldmann, Carrie E. Schweitzer, Shane T. Ahyong, Darryl L. Felder, and Rafael Lemaitre

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Disturbance Driven Colony Fragmentation as a Driver of a Coral Disease Outbreak, Marilyn E. Brandt, Tyler B. Smith, Adrienne M.S. Correa, and Rebecca Vega-Thurber

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The Sesquiterpene Lactone Dehydroleucodine Triggers Senescence and Apoptosis in Association with Accumulation of DNA Damage Markers, Valeria V. Constantino, Sabrina F. Mansilla, Juliana Speroni, Celina Amaya, Darío Cuello-Carrión, Daniel R. Ciocca, Manual A. Barbieri, Horacio A. Priestap, Vanessa Gottifredi, and Luis A. Lopez

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High natural gene expression variation in the reef-building coral Acropora millepora: potential for acclimative and adaptive plasticity, Camila Granados-Cifuentes, Anthony J. Bellantuono, Tyrone Ridgway, Ove Hoegh-Guldberg, and Mauricio Rodriguez-Lanetty

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Could Relatedness Help Explain Why Individuals Lead in Bottlenose Dolphin Groups?, Jennifer S. Lewis, Douglas Wartzok, Michael R. Heithaus, and Michael Krützen

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Microhabitat Selection by Marine Mesoconsumers in a Thermally Heterogeneous Habitat: Behavioral Thermoregulation or Avoiding Predation Risk?, Jeremy J. Vaudo and Michael R. Heithaus

Faculty Publications from 2012

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Mutation at the Human D1S80 Minisatellite Locus, Kuppareddi Balamurugan, Martin L. Tracey, Uwe Heine, George C. Maha, and George T. Duncan

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Coral Thermal Tolerance: Tuning Gene Expression to Resist Thermal Stress, Anthony J. Bellatuono, Camila Granados-Cifuentes, David J. Miller, Ove Hoegh-Guldberg, and Mauricio Rodriguez-Lanetty

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Characterization of Atlantic Cod Spawning Habitat and Behavior in Icelandic Coastal Waters, Timothy B. Grabowski, Kevin M. Boswell, Bruce J. McAdam, R.J. David Wells, and Guđrún Marteinsdóttir

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Transcriptional Response of Two Core Photosystem Genes in Symbiodinium spp. Exposed to Thermal Stress, Michael P. McGinley, Matthew D. Aschaffenburg, Daniel D. Pettay, Robin T. Smith, Todd C. LaJeunesse, and Mark E. Warner

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Estimating Global “Blue Carbon” Emissions from Conversion and Degradation of Vegetated Coastal Ecosystems, Linwood Pendleton; Daniel C. Donato; Brian C. Murray; Stephen Crooks; W. Aaron Jenkins; Samantha Sifleet; Christopher Craft; James W. Fourqurean; J. Boone Kauffman; Núria Marbà,; Patrick Megonigal; Emily Pidgeon; Dorothee Herr; David Gordon; and Alexis Baldera

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Macroalgae Decrease Growth and Alter Microbial Community Structure of the Reef-Building Coral, Porites astreoides, Rebecca Vega Thurber, Deron E. Burkepile, Adrienne M.S. Correa, Andrew R. Thurber, Andrew A. Schantz, Rory Welsh, and Catharin Pritchard

Faculty Publications from 2011

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Development of Gene Expression Markers of Acute Heat-Light Stress in Reef-Building Corals of the Genus Porites, Carly D. Kenkel, Galina Aglyamova, Ada Alamaru, Ranjeet Bhagooli, Roxana Capper, Ross Cunning, Amanda deVillers, Joshua A. Haslun, Laetitia Hédouin, Shashank Keshavmurthy, Kristin Kuehl, Huda Mahmoud, Elizabeth S. McGinty, Phanor H. Montoya-Maya, Caroline V. Palmer, Raffaella Pantile, Juan A. Sánchez, Tom Schils, Rachel N. Silverstein, Logan B. Squiers, Pei-Ciao Tang, Tamar L. Goulet, and Mikhail V. Matz

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Biodegradable Magnesium Alloys: A Review of Material Development and Applications, Dharam Persaud and Anthony McGoran

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Tyrosine Phosphorylation-Mediated Signaling Pathways in Dictyostelium, Tong Sun and Leung Kim

Faculty Publications from 2010

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Combination of 16S rRNA variable regions provides a detailed analysis of bacterial community dynamics in the lungs of cystic fibrosis patients, Melissa S. Doud, Michael Light, Gisela Gonzalez, Giri Narasimhan, and Kalai Mathee

Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida, James W. Fourqurean, Thomas J. Smith III, Jennifer Possley, Timothy M. Collins, David W. Lee, and Sandra Namoff

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Pseudomonas aeruginosa β-lactamase induction requires two permeases, AmpG and AmpP, Kok-Fai Kong, Alian Aguila, Kalai Mathee, and Lisa Schnepper

Using bottles to study shade responses of seedlings and other plants, David W. Lee and Eric Von Wettberg

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Bilirubin Present in Diverse Angiosperms, Cary Pirone, Jodie V. Johnson, J. Martin E. Quirke, Horacio A. Priestap, and David W. Lee

Faculty Publications from 2009

Unravelling the evolution of autumn colours: an interdisciplinary approach., Marco Archetti, Thomas F. Döring, Snorre B. Hagen, Nicole M. Hughes, Simon R. Leather, David W. Lee, Simcha Lev-Yadun, Yiannis Manetas, Helen J. Ougham, Paul G. Schaberg, and Howard Thomas

Are mangroves in the tropical Atlantic ripe for invasion? Exotic mangrove trees in the forests of South Florida, James W. Fourqurean, Thomas J. Smith III, Jennifer Possley, Timothy M. Collins, David W. Lee, and Sandra Namoff

Three birds with one stone: moas, heteroblasty and the New Zealand flora., David W. Lee and Kevin Gould

Animal pigment bilirubin discovered in plants, Cary Pirone, J. Martin E. Quirke, Horacio A. Priestap, and David W. Lee

Faculty Publications from 2005

Cascading ecological effects of low-level phosphorus enrichment in the Florida Everglades, Evelyn E. Gaiser, Joel C. Trexler, Jennifer H. Richards, Daniel L. Childers, David W. Lee, Adrienne L. Edwards, Leonard J. Scinto, Krish Jayachandran, Gregory B. Noe, and Ronald D. Jones

Faculty Publications from 2003

Pigment dynamics and autumn leaf senescence in a New England deciduous forest, eastern USA, David W. Lee, John O’Keefe, N. Michele Holbrook, and Taylor S. Feild

Human disturbance and forest diversity in the Tansa Valley, India, Radha Veach, David W. Lee, and Tom Philippi

Faculty Publications from 2002

Anthocyanins in Autumn Leaf Senescence, David W. Lee

Anthocyanins in Leaves: Distribution, Phylogeny and Development, David W. Lee

Shade promotes thorn development in a tropical liana, Artabotrys hexapatalus (Annonaceae), David W. Lee, Jack B. Fisher, and Usher Posluszny

Anthocyanins in Leaves and Other Vegetative Organs: An Introduction, David W. Lee and Kevin S. Gould

Why leaves turn red. Pigments called anthocyanins probably protect leaves from light damage by direct shielding and by scavenging free radicals, David W. Lee and Kevin S. Gould

Short-term changes in phosphorus storage in an oligotrophic Everglades wetland ecosystem receiving experimental nutrient enrichment, Gregory B. Noe, Daniel L. Childers, Adrienne L. Edwards, Evelyn Gaiser, Krish Jayachandran, David W. Lee, John Meeder, Jennifer Richards, Leonard J. Scinto, Joel C. Trexler, and Ronald D. Jones

Faculty Publications from 2001

Plant secondary compounds in the canopy and understorey of a tropical rain forest in Gabon, Kelsey Downum, David W. Lee, Francis Hallé, Martin Quirke, and Neil Towers

Why Leaves Turn Red in Autumn. The Role of Anthocyanins in Senescing Leaves of Red-Osier Dogwood, Taylor S. Feild, David W. Lee, and N. Michele Holbrook

Phylogenetic and ontogenetic influences on the distribution of anthocyanins and betacyanins in leaves of tropical plants, David W. Lee and Timothy M. Collins

Faculty Publications from 2000

A natural history of the Ramayana, David W. Lee

Effects of irradiance and spectral quality on leaf structure and function in seedlings of two Southeast Asian Hopea species, David W. Lee, Steven F. Oberbauer, Paulette Johnson, Baskaran Krishnapilay, Marzalina Mansor, Haris Mohamad, and Son Kheong Yap

Structural fruit coloration in Delarbrea michieana (Araliaceae), David W. Lee, George T. Taylor, and Anthony K. Irvine

Faculty Publications from 1999

Effects of light quantity and quality on early seedling development in the red mangrove Rhizophora mangle L, Stephen Smith and David W. Lee

Faculty Publications from 1998

The biology of rudraksha, David W. Lee

Faculty Publications from 1997

Iridescent blue plants. Some tropical plants produce color as insects do, using layered filters to create patterns of ligth interference. The filters' adaptive value remains a mystery., David W. Lee

Faculty Publications from 1996

Irradiance and spectral quality affect Asian tropical rain forest tree seedling development, David W. Lee, Krishnapillay Baskaran, Marzalina Mansor, Haris Mohamad, and Son Kheong Yap

Physical and ultrastructural basis of blue leaf iridescence in four Malaysian understory plants, David W. Lee and Kevin S. Gould

Faculty Publications from 1995

Why leaves are sometimes red, Kevin S. Gould, David N. Kuhn, David W. Lee, and Steven F. Oberbauer

Faculty Publications from 1993

The developmental responses of papaya leaves to simulated canopy shade, Daniel Buisson and David W. Lee

Physical and ultrastructural basis of blue leaf iridescence in two neotropical ferns., Rita M. Graham, David W. Lee, and Knut Norstog

Faculty Publications from 1991

Ultrastructural basis and function of iridescent blue colour of fruits in Elaeocarpus, David W. Lee

The spectral distribution of biologically active solar radiation at Miami, Florida, USA, David W. Lee and Kelsey R. Downum

Faculty Publications from 1990

Correlates of leaf optical properties in tropical forest sun and extreme-shade plants, David W. Lee, Richard A. Bone, Sara L. Tarsis, and David Storch

Faculty Publications from 1989

Canopy dynamics and light climates in a tropical moist deciduous forest in India, David W. Lee

Faculty Publications from 1988

Simulating Forest Shade to Study the Developmental Ecology of Tropical Plants: Juvenile Growth in Three Vines in India, David W. Lee

Faculty Publications from 1987

The Spectral Distribution of Radiation in Two Neotropical Rainforests, David W. Lee

The Selective Advantages of Anthocyanins in Developing Leaves of Mango and Cacao, David W. Lee, Susan Brammeier, and Alan P. Smith

Faculty Publications from 1986

Leaf Optical Properties of Rainforest Sun and Extreme Shade Plants, David W. Lee and Rita Graham